Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899558.1_cds_XP_016449546.1_44083
CDS Infomation

[gene=LOC107774508] [db_xref=GeneID:107774508] [protein=pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like] [protein_id=XP_016449546.1] [location=join(60179..60439,61731..62966)] [gbkey=CDS]
Sequence

ATGATCCGGAATTTGACCCGCCAGATTTCAAACGAAACACCAGTGAACCTCAGAAGACTA
TGTACGGCGGCAGAGGCAGCGGAGCTGCGTGGAGGAGATGGGCGGCTCTACCGTAGATTG
TCGGCTTTGGGAGCAACAAAAGGGTCGGTGACTGAAACAATAAATGAGTACATGAGAGAA
GGCAGAGTAGTGAAGAAGTATGAGCTGGAGAAATGCATAAAGGAGTTGCGTAAATATAAA
AGATACCAACATGCCCTTGAGATAATGGAATGGATGGAGAAAAGAGGTATAAACTTATCG
TTTGGTGATTATGGAGTACGTTTGGATCTCATAGCAAAAGTTCAAGGAATAACTGCAGCT
GAAAATTACTTTGGCGGCCTCTCACCTTCCATGCAGAATCAAAGCACTTATGGAGCACTC
TTGAATTGCTACTGTGTTGAAAAAATGACAGACAAGGCGTTGTCCCTCTTTGAGAAAATG
GATCAATTGAATTTCACATCTAAATCATTGGCATTCAACAATCTTATGTCCTTGTATATG
AGACTAGGGCAACCAGAAAAAGTGCCCCCTTTGGTACAGGAAATGAAGAGCAGAAAGGTT
CCACTATGCACATTTACATATAATATCTTGATGAATAGCTATTCTTGTTTAGGTGATATA
GAAGGAGTGGAAAGAGTCTTTGAGGAGATAAAGCAGGAGAATGCAAAGGAGTGTGATTGG
ACCACATATAGTAACTTGGCTGTTGCCTATGTTAAGGCTGGGCTTCATGACAAAGCTGAG
TTGGCTCTAAAGAAGCTTGAGGAAGAGATGGGACCTCGTAATCGTGAGGCATACCACTAT
TTGATTAGTTTGCATGCTGGAATATCTAATCTAGGTGGGGTTTATCGTATTTGGAATTCT
CTGAAATCTCATTTCTCGATAACAACCAATTCTAGTTATCTTGTCATGCTTCAGTCCCTC
GGTAAGCTTAATGACATAAATGGTTTAAAGAAATGCTACGAGGAATGGGAATCAAGCTGC
TCCAGTTATGATATGAGGCTGGCAAATAGTGTAATTGGGGCTTATCTGAGACATGACATG
TTACACGATGCGGAGGAAGTCTTCCATCATGCTTTGAAGAGATCACAAGGTCCTTTCTTC
TTGGCGTGGGAAATGTTCATGGCATTCTTTTTGAGGAATCGTCAGATCAATCTTGCTATG
AAGTGCATGGAAGCAGCTGCCTCTCGAGTAAAGAAGAACGAATGGCAGCCAAAATACGAA
ATGATCAATAAATTTCTCGAGTATTTTGTAGAAGAGAGAGATGTTGATGGTGCTGAGGAG
TTCTACAAGTATTTGAAGAAGCTGAATTGTCTTAGCAGTGATGTCTATAGTTTATTGCTT
CGCACTTACATAGTTGCCAACAGAACAGCAGAGGATATGCTACTGAGAATTAAGGAAGAT
GGGACTGAAATGAGCTGCGAGCTCGAAGACTTGCTTAAAAGGGTTTGTCCTGAATAA

Peptide Sequence

PEP ID

XP_016449546.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At1g02370, mitochondrial-like [Nicotiana tabacum]
Sequence

MIRNLTRQISNETPVNLRRLCTAAEAAELRGGDGRLYRRLSALGATKGSVTETINEYMRE
GRVVKKYELEKCIKELRKYKRYQHALEIMEWMEKRGINLSFGDYGVRLDLIAKVQGITAA
ENYFGGLSPSMQNQSTYGALLNCYCVEKMTDKALSLFEKMDQLNFTSKSLAFNNLMSLYM
RLGQPEKVPPLVQEMKSRKVPLCTFTYNILMNSYSCLGDIEGVERVFEEIKQENAKECDW
TTYSNLAVAYVKAGLHDKAELALKKLEEEMGPRNREAYHYLISLHAGISNLGGVYRIWNS
LKSHFSITTNSSYLVMLQSLGKLNDINGLKKCYEEWESSCSSYDMRLANSVIGAYLRHDM
LHDAEEVFHHALKRSQGPFFLAWEMFMAFFLRNRQINLAMKCMEAAASRVKKNEWQPKYE
MINKFLEYFVEERDVDGAEEFYKYLKKLNCLSSDVYSLLLRTYIVANRTAEDMLLRIKED
GTEMSCELEDLLKRVCPE

Transcript Sequence

Gene sequence data has not been registered.